BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D09LP1|AL428721
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig777 1043 0.0
3x_Contig1446 664 0.0
>3x_Contig777
Length = 2076
Score = 1043 bits (526), Expect = 0.0
Identities = 526/526 (100%)
Strand = Plus / Plus
Query: 1 atatagcagatcgacgtcattgactcctacacatcacgatgcaattcaaatctactattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 atatagcagatcgacgtcattgactcctacacatcacgatgcaattcaaatctactattc 1610
Query: 61 aacttttggctttggctgccgctgtttcagctgctacgacatctgatgaagttaactctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1611 aacttttggctttggctgccgctgtttcagctgctacgacatctgatgaagttaactctt 1670
Query: 121 cttcttggaccactttgaaaccaagtgctacatacaagagcgctaccacagactacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 cttcttggaccactttgaaaccaagtgctacatacaagagcgctaccacagactacagct 1730
Query: 181 caacctttggtatcgctattgagccaatcacaactggttccttggctccaactacctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 caacctttggtatcgctattgagccaatcacaactggttccttggctccaactacctctt 1790
Query: 241 ctactgccgctgtccagtcatcttctacttctgcctcctctaaggctaagagagatgccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1791 ctactgccgctgtccagtcatcttctacttctgcctcctctaaggctaagagagatgccg 1850
Query: 301 tctcccaaatcggtgatggacaaattcaaggtactaccaagactgctagctcgactagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1851 tctcccaaatcggtgatggacaaattcaaggtactaccaagactgctagctcgactagca 1910
Query: 361 gcacaacttcaaaggtcaaatcgacttctccaggagtctctcaaatcggtgacggtcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 gcacaacttcaaaggtcaaatcgacttctccaggagtctctcaaatcggtgacggtcaaa 1970
Query: 421 ttcaaggtgccacttcaactttggaaccatctagtaaatctgctagcaccgcaaccggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 ttcaaggtgccacttcaactttggaaccatctagtaaatctgctagcaccgcaaccggtg 2030
Query: 481 cgtctcagatctctgatggacaagttcaggccacatctaccgccga 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 cgtctcagatctctgatggacaagttcaggccacatctaccgccga 2076
>3x_Contig1446
Length = 10598
Score = 664 bits (335), Expect = 0.0
Identities = 348/351 (99%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 549 gatggtatcaaattgactgcatgtgctaccagcggcactctgtccatgactttgaaggat 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10598 gatggtatcaaattgactgcatgtgctaccagcggcactctgtccatgactttgaaggat 10539
Query: 609 ggtattctatacgatggcaagggaagagttggagctatcgtctctaacagacaattccaa 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10538 ggtattctatacgatggcaagggaagagttggagctatcgtctctaacagacaattccaa 10479
Query: 669 ttcgatggtccaccaccacaagctggttccatttatgccaacgg-ttggtctattaccca 727
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10478 ttcgatggtccaccaccacaagctggttccatttatgccaacggattggtctattaccca 10419
Query: 728 ggatggtaatttggcactcggtgacagtgacgttttctacaagtgcctatcaggagactt 787
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 10418 ggatggtaatttggcactcggtgacagtgacgttttctacatgtgcctatcaagagactt 10359
Query: 788 ctacaacttgtacgacgaaaacattgcagctcaatgtagcgcaatccatttgaacatcgt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10358 ctacaacttgtacgacgaaaacattgcagctcaatgtagcgcaatccatttgaacatcgt 10299
Query: 848 cagtttgaccgactgttaagatagctcaatgttattcagaaccctcatcaa 898
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10298 cagtttgaccgactgttaagatagctcaatgttattcagaaccctcatcaa 10248
Score = 147 bits (74), Expect = 4e-35
Identities = 137/158 (86%)
Strand = Plus / Minus
Query: 652 ctaacagacaattccaattcgatggtccaccaccacaagctggttccatttatgccaacg 711
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |
Sbjct: 4871 ctaacagacaattccaattcgatggtccaccaccacaagctggtgccatctatgctaagg 4812
Query: 712 gttggtctattacccaggatggtaatttggcactcggtgacagtgacgttttctacaagt 771
||||| || | || | || ||||| ||||| || ||||||||||| || |||||| | |
Sbjct: 4811 gttgggctttgactccagaaggtaacttggctctaggtgacagtgatgtcttctaccaat 4752
Query: 772 gcctatcaggagacttctacaacttgtacgacgaaaac 809
| |||||||| |||||||||||||||||||| ||||||
Sbjct: 4751 gtctatcaggtgacttctacaacttgtacgatgaaaac 4714
Score = 133 bits (67), Expect = 7e-31
Identities = 130/151 (86%)
Strand = Plus / Plus
Query: 652 ctaacagacaattccaattcgatggtccaccaccacaagctggttccatttatgccaacg 711
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || |
Sbjct: 8875 ctaacagacaattccaattcgatggtccaccaccacaagctggtgccatctatgctaagg 8934
Query: 712 gttggtctattacccaggatggtaatttggcactcggtgacagtgacgttttctacaagt 771
||||| || | || | || ||||| ||||| || ||||||||||| || |||||| | |
Sbjct: 8935 gttgggctttgactccagaaggtaacttggctctaggtgacagtgatgtcttctaccaat 8994
Query: 772 gcctatcaggagacttctacaacttgtacga 802
| |||||||| || |||||||||||||||||
Sbjct: 8995 gtctatcaggtgaattctacaacttgtacga 9025
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5459
Number of Sequences: 1807
Number of extensions: 5459
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 2
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)